PantheonOS
aristoteleo/PantheonOS
PantheonOS is a distributed multi-agent framework tailored for bioinformatics and data science pipelines, supporting automated single-cell analysis and agentic code evolution.
479 62BSD-2-ClauseUpdated 2026-08-13
80
GreatOverview
PantheonOS provides a comprehensive framework and suite of bioinformatics upstream analysis skills—ranging from bulk ATAC-seq and RNA-seq to single-cell and spatial transcriptomics—designed for agent-assisted data processing. It leverages multi-agent orchestration, distributed NATS messaging, and genetic-algorithm-driven agentic code evolution to optimize scientific tasks and automate complex workflows.
Capabilities
- ▸Bulk ATAC-seq and RNA-seq pipeline execution
- ▸Single-cell ATAC-seq and RNA-seq processing with cellranger and omicverse
- ▸Spatial transcriptomics analysis and bin-to-cell conversion
- ▸Distributed multi-agent team management and choreography
- ▸Persistent Python state management and error recovery
- ▸Interactive CLI and Chatroom UI execution
Best for
Executing bulk and single-cell RNA-seq and ATAC-seq bioinformatics pipelines, Performing spatial transcriptomics analysis and cell segmentation with Visium HD data, Orchestrating distributed multi-agent teams for automated scientific data processing, Evolving algorithms and improving analysis code using genetic algorithm techniques
Works with
Claude CodeCodexChatGPTGemini CLICursorGitHub CopilotOpenCode
Evoa Score breakdown= Σ (score × weight)
80Task usefulness20%100 → +20.0
実タスクにどれだけ役立つか（機能の豊富さ・用途の明確さ）。 — AIによるcapabilities/use-cases解析
Code quality15%88 → +13.2
実装・指示の品質。 — AIによるSKILL.md/README解析
Maintenance15%100 → +15.0
リポジトリがどれだけ活発に保守されているか。 — GitHub 最終push日時の新しさ
Documentation12%39 → +4.7
ドキュメントの充実度・分かりやすさ。 — README/独自要約の情報量
Security15%50 → +7.5
危険・不審な挙動が無いか。 — AIによるセキュリティレビュー
Originality10%92 → +9.2
ありふれたラッパーではない独自性。 — AIによる独自性判定
Popularity8%70 → +5.6
コミュニティの採用度。 — GitHub Stars/Forks（対数スケール）
Compatibility5%100 → +5.0
対応AIエージェントの広さ。 — AIによる対応エージェント判定
Weighted total80.2 / 100
ライセンス不明/制限あり（Red）のSkillは総合スコアに0.85倍の補正を適用します。 ランキングはこのScoreのみで決まり、広告で変わりません。 算出方法の詳細 →
Security considerations
Execution involves running third-party bioinformatics software pipelines, executing arbitrary Python/Bash commands, and interacting with distributed nodes via NATS. Ensure environments are properly sandboxed, especially when processing untrusted genomic data or deploying distributed agent fleets.
Categories
Summary and analysis are original content generated by AI Skills Rank. The skill's source text is not reproduced here — view it on the linked repository.